o Rŀg^@s|dZddlmZddlmZddlmZddlmZgdZeZeZGdddZ d d Z e d krJz Record._name..)rr rrrrrHz Record._namecCr#)NFORMULA)rrrrrrrMr%zRecord._formulacCr#)NMASS)rrrrrrrPr%z Record._masscCs>g}|jD]}||dd|dqtddd|DS)Nr r PATHWAYcSg|] }t|tddqS)r*rid_wrapr.rrrr1Xz#Record._pathway..)rappendrrsr rrrrSs  zRecord._pathwaycCr&)NENZYMEcSr(r)r,r.rrrr1]r2z"Record._enzyme..)rrrrrrr[r3zRecord._enzymecCsHg}|jD]}||ddd|ddqtddd|DS)Nr: r6r STRUCTUREScSr8)r*)r struct_wrapr.rrrr1er<z&Record._structures..)rr=joinrr>rrrr `s  &zRecord._structurescCsDg}|jD]}||ddd|dqtddd|DS)NrrArr DBLINKScSr8) r*r:r.rrrr1mr<z#Record._dblinks..)rr=rErr>rrrr!hs  "zRecord._dblinksN)__name__ __module__ __qualname____doc__rr"rrrrrrr r!rrrrr s  r ccst}|D]}|dddkr|Vt}q|dddkr%|dd}|dd}|dkr;|}|d|_q|dkrK|d }|j|q|d krj|ri|dd }|d d}|}|j||sQq|d kr|d \}} d|| f} |j| q|dkr||_q|dvr||_ q|dkrd|vr|d\} } | } | | f} |j | q|j d} | \} } | || | f} | |j d<qdS)aCParse a KEGG Ligan/Compound file, returning Record objects. This is an iterator function, typically used in a for loop. For example, using one of the example KEGG files in the Biopython test suite, >>> with open("KEGG/compound.sample") as handle: ... for record in parse(handle): ... print("%s %s" % (record.entry, record.name[0])) ... C00023 Iron C00017 Protein C00099 beta-Alanine C00294 Inosine C00298 Trypsin C00348 all-trans-Undecaprenyl phosphate C00349 2-Methyl-3-oxopropanoate C01386 NH2Mec Nr z z ENTRY rz NAME ;z ENZYME r9z PATHWAY r6PATHz FORMULA )z MASS z EXACT_MASS z DBLINKS :) r stripsplitr r r=rrrrrextend)handlerecordr0keyworddatawordscolumnrmapr rkeyvaluesrowrrrparseqsZ         r___main__) run_doctestN)rKBio.KEGGrrrrr-r;rDr r_rH Bio._utilsrarrrrs   T@