o Rŀg|@s8dZddlmZGdddejZGdddejZdS)zrClasses corresponding to NeXML trees. See classes in ``Bio.Nexus``: Trees.Tree, Trees.NodeData, and Nodes.Chain. )BaseTreec@seZdZdZdddZdS)TreezNeXML Tree object.NF?cCs&tjj||pt|||d||_dS)z:Instantiate a NeXML tree object with the given parameters.)rootrootedidnameN)rr__init__Cladeweight)selfrrrrr r C/var/www/html/myenv/lib/python3.10/site-packages/Bio/Phylo/NeXML.pyr s z Tree.__init__)NFNNr__name__ __module__ __qualname____doc__r r r r rrsrc@s$eZdZdZ     dddZdS)r zNeXML Clade (sub-tree) object.rNc Ks>tjj|||||d||_|D] \}}t|||qdS)z-Initialize parameters for NeXML Clade object.) branch_lengthrclades confidenceN)rr r commentitemssetattr) r rrrrrkwargskeyvaluer r rr s zClade.__init__)rNNNNrr r r rr sr N)r Bio.Phylorrr r r r rs